STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT91537.1Recombination protein RecT. (296 aa)    
Predicted Functional Partners:
SIT91532.1
Putative phage-type endonuclease.
 
  
 0.963
SIT91544.1
Uncharacterized protein; Phage replisome organizer, putative, N-terminal region/phage conserved hypothetical protein, C-terminal domain-containing protein.
 
    0.733
SIT91634.1
Phage terminase small subunit.
 
     0.650
SIT91549.1
DNA replication protein DnaC.
  
    0.645
SIT91555.1
Hypothetical protein.
       0.608
SIT91653.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.558
SIT91639.1
Phage terminase large subunit.
 
     0.553
SIT91525.1
Hypothetical protein Yqai.
       0.527
SIT91559.1
Hypothetical protein.
       0.480
SIT91504.1
Anti-repressor protein.
 
     0.444
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.