STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT91938.1Protein of unknown function. (224 aa)    
Predicted Functional Partners:
SIT91931.1
VTC domain-containing protein.
 
    0.981
SIT71584.1
Acetamidase/formamidase.
  
    0.503
SIT87242.1
Amidase.
  
    0.489
SIT91925.1
4-nitrophenyl phosphatase.
       0.456
SIT91919.1
Uncharacterized conserved protein YutE, UPF0331/DUF86 family.
       0.438
atpB
F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.432
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
  
 0.412
SIT79819.1
Cell division protease FtsH.
    
 
 0.410
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.410
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.