STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT91951.1NADH dehydrogenase. (354 aa)    
Predicted Functional Partners:
SIT68119.1
Hypothetical protein.
  
  
  0.778
SIT66377.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
 
 
 0.738
SIT91980.1
NADH dehydrogenase.
  
  
 
0.705
SIT91944.1
Uncharacterized protein YuzB, UPF0349 family; Belongs to the UPF0349 family.
 
   
 0.655
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.635
SIT69835.1
Fe-S oxidoreductase.
  
 
 0.587
SIT71858.1
BFD-like [2Fe-2S] binding domain-containing protein.
   
 
 0.576
SIT68079.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.549
SIT89291.1
Multisubunit sodium/proton antiporter, MrpA subunit.
  
 
 0.548
SIT92056.1
Multisubunit sodium/proton antiporter, MrpA subunit.
  
 
 0.548
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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