Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT92628.1 | SIT92632.1 | SAMN05428946_2823 | SAMN05428946_2824 | Predicted membrane protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.773 |
SIT92628.1 | SIT92638.1 | SAMN05428946_2823 | SAMN05428946_2825 | Predicted membrane protein. | Hypothetical protein. | 0.446 |
SIT92628.1 | SIT92642.1 | SAMN05428946_2823 | SAMN05428946_2826 | Predicted membrane protein. | Glyoxylase, beta-lactamase superfamily II. | 0.508 |
SIT92632.1 | SIT92628.1 | SAMN05428946_2824 | SAMN05428946_2823 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Predicted membrane protein. | 0.773 |
SIT92632.1 | SIT92638.1 | SAMN05428946_2824 | SAMN05428946_2825 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.446 |
SIT92632.1 | SIT92642.1 | SAMN05428946_2824 | SAMN05428946_2826 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glyoxylase, beta-lactamase superfamily II. | 0.440 |
SIT92638.1 | SIT92628.1 | SAMN05428946_2825 | SAMN05428946_2823 | Hypothetical protein. | Predicted membrane protein. | 0.446 |
SIT92638.1 | SIT92632.1 | SAMN05428946_2825 | SAMN05428946_2824 | Hypothetical protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.446 |
SIT92638.1 | SIT92642.1 | SAMN05428946_2825 | SAMN05428946_2826 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.741 |
SIT92638.1 | SIT92646.1 | SAMN05428946_2825 | SAMN05428946_2827 | Hypothetical protein. | Catalase; Belongs to the catalase family. | 0.433 |
SIT92642.1 | SIT92628.1 | SAMN05428946_2826 | SAMN05428946_2823 | Glyoxylase, beta-lactamase superfamily II. | Predicted membrane protein. | 0.508 |
SIT92642.1 | SIT92632.1 | SAMN05428946_2826 | SAMN05428946_2824 | Glyoxylase, beta-lactamase superfamily II. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.440 |
SIT92642.1 | SIT92638.1 | SAMN05428946_2826 | SAMN05428946_2825 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.741 |
SIT92642.1 | SIT92646.1 | SAMN05428946_2826 | SAMN05428946_2827 | Glyoxylase, beta-lactamase superfamily II. | Catalase; Belongs to the catalase family. | 0.449 |
SIT92646.1 | SIT92638.1 | SAMN05428946_2827 | SAMN05428946_2825 | Catalase; Belongs to the catalase family. | Hypothetical protein. | 0.433 |
SIT92646.1 | SIT92642.1 | SAMN05428946_2827 | SAMN05428946_2826 | Catalase; Belongs to the catalase family. | Glyoxylase, beta-lactamase superfamily II. | 0.449 |