STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT93106.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
SIT88777.1
Hypothetical protein.
  
  
 0.683
SIT70685.1
Type VII secretion protein EsaA, N-terminal domain-containing protein.
  
     0.618
SIT70353.1
Fucose 4-O-acetylase.
  
     0.615
map
Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.576
SIT83771.1
Hypothetical protein.
  
     0.570
SIT92585.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
    0.559
SIT80928.1
DNA-binding transcriptional regulator, MarR family.
  
     0.556
SIT91223.1
DUF4097 and DUF4098 domain-containing protein YvlB.
  
  
 0.528
SIT89424.1
PH domain-containing protein.
  
     0.480
SIT66560.1
Spore germination protein.
  
     0.478
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.