STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT93357.1Polysaccharide transporter, PST family. (537 aa)    
Predicted Functional Partners:
SIT93353.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
  
    0.825
SIT93355.1
Tetrapyrrole methylase family protein / MazG family protein.
  
    0.806
SIT90972.1
ABC-2 type transport system permease protein.
  
     0.697
SIT93346.1
Cell division protein DivIC.
 
     0.639
SIT69051.1
PDZ domain-containing protein.
  
     0.631
SIT80568.1
Lysophospholipase L1.
  
    0.595
SIT87532.1
Hypothetical protein.
  
     0.594
SIT91285.1
Central glycolytic genes regulator.
  
     0.556
SIT93351.1
Sporulation protein YabP.
  
  
 0.555
SIT93359.1
Transcriptional regulator, AbrB family.
     
 0.547
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.