STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0049KEGG: vpa:VPA0992 hypothetical protein; SPTR: A3U4C3 Transcriptional regulator, AraC family with Parallel beta-helix repeat (Fragment). (863 aa)    
Predicted Functional Partners:
Fbal_1977
DNA translocase FtsK; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR018541: IPR002543; KEGG: shl:Shal_2217 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: A2V5Z4 Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
    
 
 0.609
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.591
Fbal_2612
COGs: COG3170 Tfp pilus assembly protein FimV; InterPro IPR020011: IPR020012; KEGG: sse:Ssed_1651 hypothetical protein; SPTR: A0Y4I7 Putative orphan protein; putative membrane protein; TIGRFAM: FimV N-terminal domain; FimV C-terminal domain; TIGRFAM: FimV C-terminal domain; FimV N-terminal domain.
    
 
 0.503
Fbal_0048
Hypothetical protein.
  
    0.485
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.