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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0366COGs: COG3577 aspartyl protease; InterPro IPR001969: IPR011969; KEGG: ilo:IL2346 aspartyl protease; SPTR: A3WLN8 Predicted aspartyl protease; TIGRFAM: conserved hypothetical protein TIGR02281. (171 aa)    
Predicted Functional Partners:
Fbal_0365
COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638: IPR004393; KEGG: shn:Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating]; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: A2UYJ7 Nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
       0.799
Fbal_0367
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; COGs: COG3023 Negative regulator of beta-lactamase expression; InterPro IPR002502; KEGG: sdn:Sden_3386 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: A3WNI2 N-acetyl-anhydromuramyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase.
       0.605
Fbal_0368
Signaling modulator of AmpD, AmpE; COGs: COG3725 Membrane protein required for beta-lactamase induction; KEGG: shl:Shal_0474 regulatory protein AmpE; SPTR: A2UYJ5 Signaling modulator of AmpD, AmpE.
       0.605
Fbal_1973
Type IV pilin; COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR000983: IPR012902: IPR001120; KEGG: type IV pilin; SPTR: A2PAS8 Pilin, putative; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.472
Fbal_1282
COGs: COG3495 conserved hypothetical protein; KEGG: vsp:VS_2784 hypothetical protein; SPTR: A3UTC7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3299).
  
     0.449
Fbal_1283
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838: IPR000408; KEGG: aha:AHA_3558 peptide ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: A2P905 Putative uncharacterized protein; PFAM: Predicted permease.
  
     0.442
Fbal_0364
Methylation site containing protein; COGs: COG4969 Tfp pilus assembly protein major pilin PilA; InterPro IPR002416: IPR012902: IPR001120; KEGG: shm:Shewmr7_3604 methylation site containing protein; SPTR: P45791 Pilus biogenesis protein tapA; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.427
Fbal_1285
KEGG: asa:ASA_3512 hypothetical protein; SPTR: A3KYW2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2796).
  
     0.426
Fbal_0317
COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: shn:Shewana3_3898 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: A2V3F7 Fimbrial assembly; PFAM: Fimbrial assembly protein (PilN).
  
     0.415
Fbal_0319
COGs: COG3168 Tfp pilus assembly protein PilP; InterPro IPR007446; KEGG: saz:Sama_3370 type IV pilus biogenesis protein PilP; PFAM: Pilus assembly protein PilP; SPTR: A2V3F5 Pilus assembly protein, PilQ; PFAM: Pilus assembly protein, PilP.
  
     0.415
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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