STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0502KEGG: sse:Ssed_0784 hypothetical protein; SPTR: A3H266 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3392). (110 aa)    
Predicted Functional Partners:
Fbal_0501
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140; KEGG: vvu:VV1_1221 phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; SPTR: A3GY02 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
   
 0.638
Fbal_3224
Conserved hypothetical protein; InterPro IPR006025; KEGG: shm:Shewmr7_1896 hypothetical protein; SPTR: A2V137 Putative uncharacterized protein.
  
     0.608
Fbal_1892
InterPro IPR020008; KEGG: spl:Spea_1949 hypothetical protein; SPTR: A2V0G6 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Protein of unknown function (DUF3466); TIGRFAM: gammaproteobacterial enzyme C-terminal transmembrane domain.
  
     0.575
Fbal_2513
KEGG: swd:Swoo_1810 hypothetical protein; SPTR: A2V1Z8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2803).
  
     0.539
Fbal_2673
KEGG: spl:Spea_1332 hypothetical protein; SPTR: A0Y124 Putative uncharacterized protein.
  
     0.539
Fbal_1663
Transcriptional regulator, CadC; COGs: COG3710 DNA-binding winged-HTH domains; InterPro IPR001867; KEGG: sse:Ssed_0492 transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; SPTR: A2UUX4 Transcriptional regulator, CadC; PFAM: Transcriptional regulatory protein, C terminal.
  
     0.527
Fbal_1633
Conserved hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: swd:Swoo_3784 hypothetical protein; SPTR: A2UWP9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3584).
 
     0.525
Fbal_3075
InterPro IPR000014; KEGG: saz:Sama_2746 sensory box protein, putative; SMART: PAS domain containing protein; SPTR: A2UWZ8 Sensory box protein, putative; TIGRFAM: PAS domain S-box.
  
     0.522
Fbal_0308
Protein of unknown function DUF1439; InterPro IPR010835; KEGG: saz:Sama_0253 hypothetical protein; PFAM: protein of unknown function DUF1439; SPTR: A2V3G7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1439).
  
     0.514
Fbal_0941
KEGG: saz:Sama_1128 hypothetical protein; SPTR: A2UVK4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3301).
  
     0.512
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.