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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0580InterPro IPR000620; KEGG: ppr:PBPRB1803 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A3UML1 Putative uncharacterized protein; PFAM: EamA-like transporter family. (297 aa)    
Predicted Functional Partners:
Fbal_0581
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: ppr:PBPRB1224 putative transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A3UML2 Putative transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family.
 
    0.776
Fbal_0579
Putative methionine transporter, NhaC family; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: shm:Shewmr7_0954 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: A2UX36 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family; (TC 2.A.35.1.-).
       0.536
mpl
UDP-N-acetylmuramate; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
       0.417
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.415
Fbal_0584
COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836: IPR002375: IPR005904; KEGG: sdn:Sden_0654 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: A2UWU6 Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.415
Fbal_0797
Type IV pilin biogenesis protein, putative; COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR002035; KEGG: swp:swp_3720 type IV pilin biogenesis protein, putative; SPTR: A2V005 Type IV pilin biogenesis protein, putative.
  
     0.413
Fbal_0791
Type IV pilin biogenesis protein, putative; COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR003016; KEGG: sdn:Sden_2716 type IV pilin biogenesis protein, putative; SPTR: A2V005 Type IV pilin biogenesis protein, putative.
  
     0.406
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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