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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0806Doubled CXXCH domain protein; InterPro IPR011717: IPR001440: IPR010177: IPR013105: IPR 019734: IPR013026: IPR011031; KEGG: ppw:PputW619_1988 TPR repeat-containing protein; PFAM: doubled CXXCH domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: A0YGC8 TPR domain protein; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); Tetratricopeptide repeat; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; doubled CXXCH domain. (760 aa)    
Predicted Functional Partners:
Fbal_0805
KEGG: ppg:PputGB1_3052 nonspecific acid phosphatase; SPTR: A3HUP4 Nonspecific acid phosphatase.
 
 
   0.944
Fbal_0119
OmpA/MotB domain protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR006664: IPR020472: IPR006665: IPR005532: IPR 019781: IPR001680: IPR019775: IPR019782: IPR017986; KEGG: dal:Dalk_2629 protein of unknown function DUF323; PFAM: OmpA/MotB domain protein; protein of unknown function DUF323; WD40 repeat, subgroup; SMART: WD-40 repeat protein; SPTR: B8LTB2 Pfs, NACHT and WD domain protein; PFAM: Formylglycine-generating sulfatase enzyme; WD domain, G-beta repeat; OmpA family.
  
 0.915
Fbal_0804
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: vpa:VPA0680 arylsulfatase; PFAM: sulfatase; SPTR: A3UMU0 Arylsulfatase; PFAM: Sulfatase.
 
 
  0.902
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.868
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.851
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.813
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.800
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  0.780
Fbal_3395
Glucose-methanol-choline oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172; KEGG: swp:swp_0762 oxidoreductase, GMC family; PFAM: glucose-methanol-choline oxidoreductase; SPTR: A2V4B6 Glucose-methanol-choline oxidoreductase; PFAM: GMC oxidoreductase.
    
 0.756
Fbal_0120
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: avn:Avin_05330 glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; SPTR: A1ZS81 Two-component system sensor histidine kinase/response regulator, hybrid; PFAM: Glycosyl transferase family 2.
  
 
 0.732
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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