STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0807COGs: COG3474 Cytochrome c2; InterPro IPR002327: IPR003088: IPR009056; KEGG: vpa:VPA1144 hypothetical protein; PFAM: cytochrome c class I; SPTR: A3SHJ5 Putative uncharacterized protein; PFAM: Cytochrome c. (210 aa)    
Predicted Functional Partners:
Fbal_3421
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.977
Fbal_0808
Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; COGs: COG2041 Sulfite oxidase; InterPro IPR008335: IPR000572: IPR005066: IPR006311; KEGG: vpa:VPA1143 putative molybdenum containing oxidoreductase; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; PRIAM: Sulfite oxidase; SPTR: A3SHJ6 Putative molybdenum containing oxidoreductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 
 0.974
Fbal_3419
COGs: COG2857 Cytochrome c1; InterPro IPR002326: IPR009056; KEGG: shw:Sputw3181_0667 cytochrome c1; PFAM: cytochrome c1; SPTR: A2UUP2 Cytochrome c1; PFAM: Cytochrome C1 family.
  
 0.939
Fbal_0185
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.932
Fbal_3420
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.918
Fbal_0929
InterPro IPR001450: IPR017900; KEGG: shw:Sputw3181_1209 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A2UZC3 4Fe-4S ferredoxin, iron-sulfur binding.
   
   0.870
Fbal_1903
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR004677; KEGG: saz:Sama_1791 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A2UZN0 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.859
Fbal_1904
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: ppr:PBPRA1832 putative Cbb3-type cytochrome oxidase, cytochrome c subunit; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A3H0K8 Cytochrome c oxidase subunit CcoO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.852
Fbal_1906
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.841
Fbal_2044
COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429: IPR003088: IPR001505: IPR009056; KEGG: rso:RSp1564 cytochrome c oxidase polypeptide II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; SPTR: A3RP06 Cytochrome c oxidase subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c.
   
 0.829
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.