STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0809InterPro IPR013096; KEGG: tgr:Tgr7_1816 cupin 2, conserved barrel; PFAM: Cupin 2 conserved barrel domain protein; SPTR: A3RR10 Putative uncharacterized protein; PFAM: Cupin domain. (149 aa)    
Predicted Functional Partners:
Fbal_3774
Transcriptional regulator, histidine utilization repressor, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524: IPR011663: IPR010248; KEGG: spl:Spea_4170 histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A2UY01 Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial.
  
    0.645
Fbal_1147
Transcriptional regulator, XRE family with cupin sensor; COGs: COG1396 transcriptional regulator protein; InterPro IPR013096: IPR001387; KEGG: asa:ASA_4154 putative transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A2V033 Transcriptional regulator, XRE family with cupin sensor; PFAM: Cupin domain; Helix-turn-helix.
  
 
 0.484
Fbal_3274
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR007597; KEGG: aha:AHA_1797 response regulator; PFAM: response regulator receiver; CheC domain protein; SMART: response regulator receiver; SPTR: A2UUS4 CheC, inhibitor of MCP methylation; PFAM: Response regulator receiver domain; CheC-like family.
    
   0.475
Fbal_0811
(SSU ribosomal protein S18P)-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
     
 0.466
Fbal_0810
Hypothetical protein.
       0.460
cobB
Silent information regulator protein Sir2; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: shw:Sputw3181_1746 NAD-dependent deacetylase; PFAM: Silent information regulator protein Sir2; SPTR: A2V1G4 Silent information regulator protein Sir2; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.456
Fbal_0808
Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; COGs: COG2041 Sulfite oxidase; InterPro IPR008335: IPR000572: IPR005066: IPR006311; KEGG: vpa:VPA1143 putative molybdenum containing oxidoreductase; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; PRIAM: Sulfite oxidase; SPTR: A3SHJ6 Putative molybdenum containing oxidoreductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
       0.447
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.439
Fbal_0807
COGs: COG3474 Cytochrome c2; InterPro IPR002327: IPR003088: IPR009056; KEGG: vpa:VPA1144 hypothetical protein; PFAM: cytochrome c class I; SPTR: A3SHJ5 Putative uncharacterized protein; PFAM: Cytochrome c.
       0.436
Fbal_1564
COGs: COG4257 Streptogramin lyase; KEGG: noc:Noc_0277 streptogramin lyase; SPTR: A0Z1G6 Possible streptogramin lyase, gluconolactonase family protein.
  
    0.417
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.