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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0878OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: spl:Spea_2987 flagellar motor protein MotB; PFAM: OmpA/MotB domain protein; SPTR: A2UVE4 OmpA/MotB; PFAM: OmpA family. (314 aa)    
Predicted Functional Partners:
Fbal_0877
MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898: IPR000540; KEGG: slo:Shew_2768 flagellar motor protein PomA; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A2UVE3 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family.
 
 0.999
Fbal_2296
MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898: IPR006025: IPR000540; KEGG: sse:Ssed_0050 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q03477 Chemotaxis protein lafT; PFAM: MotA/TolQ/ExbB proton channel family.
  
 0.992
Fbal_1055
CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR004358: IPR008207: IPR004105: IPR002545: IPR 003594: IPR005467; KEGG: shm:Shewmr7_1369 CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; SPTR: A2UYZ8 CheA signal transduction histidine kinases; PFAM: CheW-like domain; Histidine kinase-, DNA gyra [...]
 
  
 0.923
Fbal_2667
Response regulator receiver modulated CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789: IPR002545; KEGG: sfr:Sfri_1159 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; SPTR: A2UYV5 Response regulator receiver modulated CheW protein; PFAM: CheW-like domain; Response regulator receiver domain.
 
  
 0.917
Fbal_2295
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: sse:Ssed_0049 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: Q03478 Chemotaxis protein lafU; PFAM: OmpA family.
     
0.916
Fbal_0104
Response regulator receiver modulated CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789: IPR002545; KEGG: saz:Sama_2201 chemotaxis protein CheV; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; SPTR: A2V174 Response regulator receiver modulated CheW protein; PFAM: CheW-like domain; Response regulator receiver domain.
 
  
 0.915
Fbal_0158
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.883
Fbal_2664
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR019776: IPR006299; KEGG: slo:Shew_1346 flagellar basal body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A2UYV8 Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.879
Fbal_1036
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.877
Fbal_1054
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
  
 0.865
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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