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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_0974COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451: IPR018357; KEGG: son:SO_3152 acetyltransferase; SPTR: A2V3A2 Transferase hexapeptide repeat. (205 aa)    
Predicted Functional Partners:
Fbal_0264
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362: IPR017475: IPR017473; KEGG: vpa:VPA1403 putative capsular polysaccharide biosynthesis glycosyltransferase; PFAM: sugar transferase; SPTR: A0XZW2 UDP-glucose lipid carrier transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polypre [...]
  
  
 0.824
Fbal_0976
KEGG: sbp:Sbal223_1506 lipoprotein, putative; SPTR: A2V3A4 Lipoprotein, putative.
       0.788
Fbal_0975
Protein of unknown function UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: vco:VC0395_A0401 hypothetical protein; PFAM: protein of unknown function UPF0066; SPTR: A3H1R7 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: conserved hypothetical protein TIGR00104.
       0.781
Fbal_0977
Conserved hypothetical protein; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR017871; KEGG: she:Shewmr4_1349 hypothetical protein; SPTR: A3WN74 Predicted amidohydrolase.
       0.625
Fbal_0978
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680: IPR013108; KEGG: sse:Ssed_1443 amidohydrolase; PFAM: amidohydrolase; Amidohydrolase 3; SPTR: A3WN83 Secreted enzyme, contains two amidohydrolase related domains; PFAM: Amidohydrolase family.
       0.611
Fbal_0122
COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: dat:HRM2_32260 predicted glycosyltransferase; PFAM: sugar transferase; SPTR: A3VTM1 Putative uncharacterized protein; PFAM: Bacterial sugar transferase.
 
  
 0.531
Fbal_0267
Capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856: IPR003593: IPR005702; KEGG: vco:VC0395_A0461 putative exopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SMART: AAA ATPase; SPTR: A2PUD0 Exopolysaccharide biosynthesis protein, putative; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
  
 0.478
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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