STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1007Cobalt transport protein; InterPro IPR003339; KEGG: saz:Sama_0133 hypothetical protein; PFAM: cobalt transport protein; SPTR: A2V3I0 Cobalt transport protein; PFAM: Cobalt transport protein. (208 aa)    
Predicted Functional Partners:
Fbal_3603
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: sbl:Sbal_0080 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A2V3J1 ABC transporter related; PFAM: ABC transporter.
  
 
 0.985
Fbal_1006
KEGG: slo:Shew_3673 hypothetical protein; SPTR: A2V3H9 Putative uncharacterized protein.
       0.795
Fbal_1005
KEGG: slo:Shew_3672 hypothetical protein; SPTR: A2V3H8 Putative uncharacterized protein.
  
    0.788
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.781
Fbal_1008
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439: IPR003593: IPR019775: IPR019825; KEGG: sbm:Shew185_4309 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A2V3I1 ABC transporter related; PFAM: ABC transporter.
       0.776
Fbal_1009
TonB-dependent receptor plug; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR000531: IPR012910: IPR017975; KEGG: she:Shewmr4_3867 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: A2V3I2 TonB-dependent receptor, plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
       0.776
Fbal_1004
KEGG: shm:Shewmr7_3955 hypothetical protein; SPTR: A2V3H7 Putative uncharacterized protein.
       0.773
thiE
Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
  
 0.658
Fbal_1966
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR001347: IPR000281; KEGG: shw:Sputw3181_2143 DNA-binding transcriptional regulator HexR; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: A2V5D5 Transcriptional regulator, RpiR family; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
    0.604
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
  
 0.540
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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