STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1069Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR010425: IPR019554: IPR003715; KEGG: slo:Shew_1399 polysaccharide export protein; PFAM: polysaccharide export protein; protein of unknown function DUF1017; Soluble ligand binding domain; SPTR: A0XZ21 Polysaccharide biosynthesis/export protein; PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain. (937 aa)    
Predicted Functional Partners:
Fbal_0267
Capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856: IPR003593: IPR005702; KEGG: vco:VC0395_A0461 putative exopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SMART: AAA ATPase; SPTR: A2PUD0 Exopolysaccharide biosynthesis protein, putative; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
 
 0.943
Fbal_0264
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362: IPR017475: IPR017473; KEGG: vpa:VPA1403 putative capsular polysaccharide biosynthesis glycosyltransferase; PFAM: sugar transferase; SPTR: A0XZW2 UDP-glucose lipid carrier transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polypre [...]
  
  
 0.927
Fbal_1070
InterPro IPR003856; KEGG: she:Shewmr4_1317 lipopolysaccharide biosynthesis; PFAM: lipopolysaccharide biosynthesis protein; SPTR: A2UZ12 Lipopolysaccharide biosynthesis; PFAM: Chain length determinant protein.
 
     0.910
Fbal_0124
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554: IPR003715; KEGG: pfl:PFL_3082 polysaccharide biosynthesis/export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: A0ZMF4 Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 
0.904
Fbal_0123
Lipopolysaccharide biosynthesis protein; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: pfo:Pfl01_2020 lipopolysaccharide biosynthesis; PFAM: lipopolysaccharide biosynthesis protein; SPTR: A3L961 Putative uncharacterized protein; PFAM: Chain length determinant protein.
  
 
 0.875
Fbal_0449
Lipopolysaccharide biosynthesis protein; COGs: COG3524 Capsule polysaccharide export protein; InterPro IPR003856; KEGG: mpt:Mpe_A0622 capsular polysaccharide ABC transporter; PFAM: lipopolysaccharide biosynthesis protein; SPTR: P62587 Capsule polysaccharide export inner-membrane protein kpsE; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family.
  
  
 0.785
Fbal_0450
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: fph:Fphi_1159 putative capsule polysaccharide export transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: P24586 Polysialic acid transport ATP-binding protein kpsT.
  
  
 0.777
Fbal_0451
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013526: IPR013525: IPR000412; KEGG: ebr:ECB_02828 polysialic acid transport protein KpsM; PFAM: ABC-2 type transporter; SPTR: P24584 Polysialic acid transport protein kpsM; PFAM: ABC-2 type transporter.
  
  
 0.773
Fbal_0437
COGs: COG3563 Capsule polysaccharide export protein; InterPro IPR007833: IPR000463; KEGG: ecp:ECP_3028 capsule export protein KpsC; PFAM: Capsule polysaccharide biosynthesis protein; SPTR: P42217 Capsule polysaccharide export protein kpsC; PFAM: Capsule polysaccharide biosynthesis protein.
  
  
 0.741
wecA
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). Belongs to the glycosyltransferase 4 family. WecA subfamily.
  
  
 0.615
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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