STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1237COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: vha:VIBHAR_04753 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Hydroxypyruvate isomerase; SPTR: A3UPL6 Hydroxypyruvate isomerase, putative; PFAM: Xylose isomerase-like TIM barrel; Belongs to the hyi family. (259 aa)    
Predicted Functional Partners:
Fbal_1239
Type III effector Hrp-dependent outers domain protein; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: vha:VIBHAR_04751 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: type III effector Hrp-dependent outers; SPTR: A3UPL8 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF1537.
 
  
 0.950
Fbal_1238
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: aha:AHA_1059 putative aldolase; PFAM: class II aldolase/adducin family protein; SPTR: A3UPL7 Putative uncharacterized protein; PFAM: Class II Aldolase and Adducin N-terminal domain.
 
  
 0.926
Fbal_1240
2-hydroxy-3-oxopropionate reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115: IPR002204; KEGG: pmu:PM1366 hypothetical protein; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: A3UPL9 Putative uncharacterized protein; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase.
 
  
 0.922
Fbal_1236
COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474: IPR004680: IPR010656: IPR006162; KEGG: vha:VIBHAR_04754 H+/gluconate symporter; PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A3UPL5 Gluconate permease; PFAM: GntP family permease; TIGRFAM: gluconate transporter.
 
   
 0.655
Fbal_1241
Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR013196: IPR014036: IPR018356; KEGG: spe:Spro_1493 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; SPTR: A3UPM0 Glycerol-3-phosphate regulon repressor; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
 
  
 0.649
Fbal_1400
6-phosphogluconate dehydrogenase NAD-binding protein; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006183: IPR006115: IPR002204; KEGG: slo:Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: O33730 Uncharacterized oxidoreductase Sfri_1503; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase.
  
 0.546
Fbal_1023
COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR004455: IPR006115: IPR002204: IPR011548; KEGG: sbp:Sbal223_2851 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; PRIAM: 3-hydroxyisobutyrate dehydrogenase; SPTR: A2V1P4 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
 0.494
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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