STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1338RarD protein, DMT superfamily transporter; COGs: COG2962 permease; InterPro IPR000620: IPR004626; KEGG: shl:Shal_2568 transporter DMT superfamily protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A3RQ29 RarD; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: EamA-like transporter family; TIGRFAM: rarD protein. (304 aa)    
Predicted Functional Partners:
Fbal_1339
Protein of unknown function DUF1176; InterPro IPR009560; KEGG: vvy:VVA1675 putative regulatory protein; PFAM: protein of unknown function DUF1176; PFAM: Protein of unknown function (DUF1176).
       0.408
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.