STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1427Protein of unknown function DUF882; COGs: COG3108 conserved hypothetical protein; InterPro IPR013230: IPR010275: IPR006311; KEGG: spl:Spea_1958 hypothetical protein; PFAM: protein of unknown function DUF882; Peptidase M15A; SPTR: A2UZG3 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF882). (184 aa)    
Predicted Functional Partners:
Fbal_1426
Peptidoglycan-binding domain 1 protein; COGs: COG2989 conserved hypothetical protein; InterPro IPR002477: IPR005490; KEGG: asa:ASA_1213 hypothetical protein; PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; SPTR: A2UZG2 Peptidoglycan-binding domain 1; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain.
 
     0.875
Fbal_2354
ErfK/YbiS/YcfS/YnhG family protein; COGs: COG2989 conserved hypothetical protein; InterPro IPR002477: IPR005490; KEGG: sse:Ssed_2377 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; SPTR: P22525 Uncharacterized protein ycbB; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain.
 
     0.772
Fbal_1352
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: shw:Sputw3181_1580 beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SPTR: A2V429 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily.
  
    0.768
Fbal_1462
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: vap:Vapar_5001 beta-lactamase domain protein; PFAM: beta-lactamase domain protein; SPTR: A3JY79 Metallo-beta-lactamase; PFAM: Metallo-beta-lactamase superfamily.
  
    0.671
rplY
LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.
       0.497
Fbal_0682
Aminotransferase class V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR001279: IPR000192: IPR020578: IPR001763; KEGG: slo:Shew_3354 aminotransferase, class V; PFAM: aminotransferase class V; beta-lactamase domain protein; SPTR: A0Y022 Putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily protein; PFAM: Rhodanese-like domain; Aminotransferase class-V.
  
    0.454
Fbal_1808
ErfK/YbiS/YcfS/YnhG family protein; COGs: COG1376 conserved hypothetical protein; InterPro IPR018392: IPR005490: IPR002482; KEGG: vvy:VVA0358 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: A3ULK2 Uncharacterized protein conserved in bacteria; PFAM: L,D-transpeptidase catalytic domain.
 
     0.454
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
    0.443
Fbal_2496
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: swp:swp_2280 beta-lactamase-like protein; PFAM: beta-lactamase domain protein; SPTR: A2TU75 Zn-dependent hydrolase, glyoxylase family protein; PFAM: Metallo-beta-lactamase superfamily.
  
    0.443
Fbal_2810
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: dol:Dole_1748 beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SPTR: A1ZYL8 Metallo-beta-lactamase family protein; PFAM: Metallo-beta-lactamase superfamily.
  
    0.443
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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