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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1600KEGG: saz:Sama_1455 hypothetical protein; SPTR: A2V0J4 Putative uncharacterized protein. (279 aa)    
Predicted Functional Partners:
Fbal_0941
KEGG: saz:Sama_1128 hypothetical protein; SPTR: A2UVK4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3301).
  
     0.731
Fbal_1597
KEGG: shn:Shewana3_2499 hypothetical protein; SPTR: A2V0J1 Putative uncharacterized protein; PFAM: YKOF-related Family.
 
     0.689
Fbal_1598
COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: slo:Shew_1737 nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: A2V0J2 Nicotinamide mononucleotide transporter PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC.
 
     0.669
Fbal_1596
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: spc:Sputcn32_1660 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A2V0J0 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
     0.660
Fbal_1599
Aminoglycoside phosphotransferase; COGs: COG0510 choline kinase involved in LPS biosynthesis; InterPro IPR002575: IPR002573; KEGG: rlt:Rleg2_4020 choline/ethanolamine kinase; PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; SPTR: A0Y817 Cholinephosphate cytidylyltransferase/choline kinase; PFAM: Phosphotransferase enzyme family.
       0.619
Fbal_0556
KEGG: swd:Swoo_0725 hypothetical protein; SPTR: A0Y4A8 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF350).
  
     0.618
Fbal_1601
DoxX family protein; COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: sdn:Sden_2316 DoxX; PFAM: DoxX family protein; SPTR: A3KWV5 Putative uncharacterized protein; PFAM: DoxX.
       0.570
bamC
NlpBDapX family lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.566
Fbal_3104
KEGG: spl:Spea_0984 hypothetical protein; SPTR: A2V2B1 Putative uncharacterized protein.
  
     0.470
Fbal_3744
Domain of unknown function DUF2489; InterPro IPR019617; KEGG: asa:ASA_4126 hypothetical protein; PFAM: Domain of unknown function DUF2489; SPTR: A2V5C6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2489).
  
     0.465
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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