STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1663Transcriptional regulator, CadC; COGs: COG3710 DNA-binding winged-HTH domains; InterPro IPR001867; KEGG: sse:Ssed_0492 transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; SPTR: A2UUX4 Transcriptional regulator, CadC; PFAM: Transcriptional regulatory protein, C terminal. (420 aa)    
Predicted Functional Partners:
Fbal_0432
Decaheme c-type cytochrome, OmcA/MtrC family; InterPro IPR011031: IPR020014; KEGG: saz:Sama_2228 decaheme cytochrome c; SPTR: A2V1M0 Decaheme cytochrome c; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family.
  
     0.774
Fbal_1359
Decaheme c-type cytochrome, OmcA/MtrC family; InterPro IPR011031: IPR020014; KEGG: swd:Swoo_3124 decaheme cytochrome c; SPTR: A2V0Y9 Putative uncharacterized protein; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family.
  
     0.774
Fbal_1362
Decaheme c-type cytochrome, OmcA/MtrC family; InterPro IPR011031: IPR020014; KEGG: shn:Shewana3_2674 decaheme cytochrome c MtrF; SPTR: A2V0Y8 Decaheme cytochrome c; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family.
  
     0.774
Fbal_3227
Decaheme c-type cytochrome, OmcA/MtrC family; InterPro IPR011031: IPR020014; KEGG: sse:Ssed_3588 decaheme cytochrome c; SPTR: A2V0Y9 Putative uncharacterized protein; TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family; PFAM: Collagen triple helix repeat (20 copies); TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family.
  
     0.774
Fbal_1355
Decaheme-associated outer membrane protein, MtrB/PioB family; InterPro IPR020016; KEGG: sse:Ssed_1403 outer membrane protein; SPTR: A2UWK8 Outer membrane protein; TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; PFAM: Protein of unknown function (DUF3374); TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family.
  
     0.772
Fbal_1823
Serine/threonine protein kinase; InterPro IPR011528: IPR002290: IPR000719: IPR006052; KEGG: slo:Shew_2466 hypothetical protein; PFAM: NERD domain protein; SMART: serine/threonine protein kinase; SPTR: A3TIY2 Transmembrane serine/threonine-protein kinase a pkna (Proteinkinase a) (Stpk a); PFAM: Protein kinase domain; Nuclease-related domain.
  
     0.771
Fbal_2477
Decaheme-associated outer membrane protein, MtrB/PioB family; InterPro IPR020016; KEGG: sse:Ssed_1306 outer membrane protein; SPTR: A2UWK8 Outer membrane protein; TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; PFAM: Protein of unknown function (DUF3374); TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family.
  
     0.769
Fbal_3620
Decaheme-associated outer membrane protein, MtrB/PioB family; InterPro IPR020016; KEGG: sse:Ssed_1306 outer membrane protein; SPTR: A2UWK8 Outer membrane protein; TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; PFAM: Protein of unknown function (DUF3374); TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family.
  
     0.769
Fbal_1549
Tetraheme cytochrome c; InterPro IPR011031; KEGG: sse:Ssed_4179 tetraheme cytochrome c; SPTR: A2UXH8 Tetraheme cytochrome c, putative; TIGRFAM: doubled CXXCH domain.
  
     0.768
Fbal_1892
InterPro IPR020008; KEGG: spl:Spea_1949 hypothetical protein; SPTR: A2V0G6 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Protein of unknown function (DUF3466); TIGRFAM: gammaproteobacterial enzyme C-terminal transmembrane domain.
  
     0.768
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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