STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1919Protein of unknown function DUF214; InterPro IPR003838; KEGG: pfo:Pfl01_2027 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: A0Y0L0 Putative ABC transporter, permease protein; PFAM: Predicted permease. (782 aa)    
Predicted Functional Partners:
Fbal_1918
Protein of unknown function DUF2006; COGs: COG5621 secreted hydrolase; InterPro IPR018549; KEGG: cps:CPS_2642 putative lipoprotein; PFAM: Protein of unknown function DUF2006; SPTR: A0Y0K9 Putative lipoprotein; PFAM: Hydroxyneurosporene synthase (CrtC).
  
 0.982
Fbal_1920
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: cps:CPS_2640 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0Y0L1 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
  
 0.833
Fbal_1921
Protein of unknown function DUF227; InterPro IPR002575: IPR004119: IPR015897; KEGG: pat:Patl_3439 hypothetical protein; PFAM: protein of unknown function DUF227; aminoglycoside phosphotransferase; SMART: CHK kinase-like; SPTR: A1ZY78 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF227).
       0.668
Fbal_1922
Conserved hypothetical protein; COGs: COG3647 membrane protein; InterPro IPR014509; KEGG: pha:PSHAa1265 inner membrane protein; PFAM: conserved hypothetical protein; SPTR: A0XZT7 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2238).
       0.668
Fbal_1917
COGs: COG1448 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR000796: IPR004839: IPR004838; KEGG: esa:ESA_02414 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II; PRIAM: Aspartate transaminase; SPTR: P00509 Aspartate aminotransferase; PFAM: Aminotransferase class I and II.
       0.586
Fbal_1923
KEGG: pha:PSHAa0160 hypothetical protein; SPTR: A3JTW4 Predicted membrane protein.
 
     0.570
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.