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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1973Type IV pilin; COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR000983: IPR012902: IPR001120; KEGG: type IV pilin; SPTR: A2PAS8 Pilin, putative; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (144 aa)    
Predicted Functional Partners:
Fbal_1972
Putative type IV pilin; InterPro IPR012902: IPR001120; KEGG: tau:Tola_2517 putative type IV pilin; SPTR: A0Z6K7 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.944
Fbal_1969
Hypothetical protein; InterPro IPR012902; KEGG: aha:AHA_0696 putative type IV pilin; SPTR: A3H1Q4 Type 4 fimbrial biogenesis protein PilV; TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.910
Fbal_1971
COGs: COG4966 Tfp pilus assembly protein PilW; InterPro IPR001120: IPR012902; KEGG: tau:Tola_2516 putative type IV pilin; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.885
Fbal_1970
KEGG: hypothetical protein.
  
  
 0.850
Fbal_0317
COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: shn:Shewana3_3898 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: A2V3F7 Fimbrial assembly; PFAM: Fimbrial assembly protein (PilN).
 
  
 0.816
Fbal_0789
Prepilin-type cleavage/methylation-like protein; COGs: COG4966 Tfp pilus assembly protein PilW; InterPro IPR001120: IPR012902; KEGG: sse:Ssed_1199 prepilin-type cleavage/methylation-like protein; SPTR: A2V003 Prepilin-type cleavage/methylation-like; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.814
Fbal_0318
COGs: COG3167 Tfp pilus assembly protein PilO; InterPro IPR007445; KEGG: shn:Shewana3_3897 pilus assembly protein, PilO; PFAM: Pilus assembly protein PilO; SPTR: A2V3F6 Pilus assembly protein, PilO; PFAM: Pilus assembly protein, PilO.
 
   
 0.800
Fbal_0320
Type IV pilus secretin PilQ; COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR001775: IPR004846: IPR011662: IPR005644: IPR 018252: IPR004845: IPR013355; KEGG: shw:Sputw3181_3848 type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; SPTR: A2V3F4 Type IV pilus secretin PilQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or [...]
 
   
 0.795
Fbal_0319
COGs: COG3168 Tfp pilus assembly protein PilP; InterPro IPR007446; KEGG: saz:Sama_3370 type IV pilus biogenesis protein PilP; PFAM: Pilus assembly protein PilP; SPTR: A2V3F5 Pilus assembly protein, PilQ; PFAM: Pilus assembly protein, PilP.
  
  
 0.792
Fbal_0316
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: sbn:Sbal195_4207 type IV pilus assembly protein PilM; SPTR: A2V3F8 Type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM.
 
   
 0.772
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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