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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1982ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; COGs: COG4987 ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components; InterPro IPR003439: IPR003593: IPR017871: IPR017940: IPR 014223; KEGG: ppr:PBPRA1157 cysteine/glutathione ABC transporter membrane/ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A3H2Z0 Transport ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter tra [...] (556 aa)    
Predicted Functional Partners:
Fbal_1981
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; COGs: COG4988 ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components; InterPro IPR003439: IPR001140: IPR003593: IPR001412: IPR 017871: IPR017940: IPR014216; KEGG: dze:Dd1591_2363 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: P29018 ATP-binding/permease protein cydD; TIGRFAM: ABC transporter, CydDC cysteine exporte [...]
 
 
0.998
Fbal_2694
COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: slo:Shew_1303 cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; SPTR: A2UYT8 Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB).
 
  
 0.965
Fbal_2695
COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: shw:Sputw3181_1366 cytochrome bd ubiquinol oxidase, subunit I; PFAM: cytochrome bd ubiquinol oxidase subunit I; SPTR: A2UYT7 Cytochrome bd ubiquinol oxidase, subunit I; PFAM: Bacterial Cytochrome Ubiquinol Oxidase.
 
  
 0.949
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.846
Fbal_1980
COGs: COG0492 Thioredoxin reductase; InterPro IPR000759: IPR013027: IPR000103: IPR001327: IPR 008255: IPR005982; KEGG: vha:VIBHAR_02606 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A3UWG7 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
       0.642
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
     
0.455
Fbal_2693
Cyd operon protein YbgT; InterPro IPR012994: IPR011724; KEGG: vfi:VF_0955 cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; SPTR: A3UU51 Protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT.
 
  
 0.428
pstB-2
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.427
Fbal_1979
COGs: COG0686 Alanine dehydrogenase; InterPro IPR006036: IPR013027: IPR007886: IPR006151: IPR 007698: IPR008143: IPR008141; KEGG: slo:Shew_2026 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: A0Y1K5 Alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; Belongs to the AlaDH/PNT family.
       0.410
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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