Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Fbal_2001Sensory transduction regulator, putative; InterPro IPR019660; KEGG: aha:AHA_1824 hypothetical protein; PFAM: Sensory transduction regulator, putative; SPTR: P0AAY9 Uncharacterized protein ybjN; PFAM: Putative bacterial sensory transduction regulator. (156 aa)    
Predicted Functional Partners:
rimK
COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR003806: IPR013651: IPR011761: IPR004666; KEGG: cja:CJA_1251 ribosomal protein S6 modification protein; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; SPTR: B3PCD4 Ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family.
 
  
 0.816
Fbal_1623
COGs: COG3102 conserved hypothetical protein; KEGG: shw:Sputw3181_1725 hypothetical protein; SPTR: A2V1I7 Putative uncharacterized protein; PFAM: YecM protein.
  
     0.707
Fbal_2515
Protein of unknown function UPF0227; COGs: COG3150 esterase; InterPro IPR008886; KEGG: ses:SARI_01781 hypothetical protein; PFAM: protein of unknown function UPF0227; SPTR: B4TTI0 UPF0227 protein ycfP; PFAM: Uncharacterised protein family (UPF0227); Belongs to the UPF0227 family.
  
     0.651
Fbal_2617
YfcL protein; InterPro IPR014987; KEGG: slo:Shew_2413 hypothetical protein; PFAM: YfcL protein; SPTR: A2V1C1 Putative uncharacterized protein; PFAM: YfcL protein.
  
     0.623
Fbal_0617
Protein of unknown function DUF903; InterPro IPR010305; KEGG: vha:VIBHAR_05819 hypothetical protein; PFAM: protein of unknown function DUF903; SPTR: P65297 Uncharacterized lipoprotein ygdR; PFAM: Bacterial protein of unknown function (DUF903).
  
     0.607
Fbal_0308
Protein of unknown function DUF1439; InterPro IPR010835; KEGG: saz:Sama_0253 hypothetical protein; PFAM: protein of unknown function DUF1439; SPTR: A2V3G7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1439).
  
     0.606
Fbal_3200
Von Willebrand factor type A; COGs: COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: vha:VIBHAR_05671 hypothetical protein; SMART: von Willebrand factor type A; SPTR: A3GP33 Putative uncharacterized protein; PFAM: VWA domain containing CoxE-like protein.
  
     0.604
Fbal_2252
Protein of unknown function DUF1190; COGs: COG5463 integral membrane protein; InterPro IPR009576; KEGG: kpu:KP1_4731 hypothetical protein; PFAM: protein of unknown function DUF1190; SPTR: A6TE25 UPF0441 protein KPN78578_33850; PFAM: Protein of unknown function (DUF1190).
  
     0.593
Fbal_0751
Protein of unknown function DUF2505; InterPro IPR019639; KEGG: ppr:PBPRA1871 hypothetical protein; PFAM: Protein of unknown function DUF2505; PFAM: Protein of unknown function (DUF2505).
  
     0.577
Fbal_1405
alpha-L-glutamate ligase, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR003806: IPR013651: IPR011761: IPR004666; KEGG: son:SO_2200 ribosomal protein S6 modification protein, putative; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; SPTR: A2V4S7 Alpha-L-glutamate ligases, RimK family; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family.
  
  
 0.536
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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