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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2010Diguanylate cyclase with extracellular sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR001638; KEGG: she:Shewmr4_1897 diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; SPTR: A2UZK4 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; diguanylate cyclase [...] (889 aa)    
Predicted Functional Partners:
Fbal_3751
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013655: IPR001633: IPR000160: IPR003660: IPR 001610: IPR000014; KEGG: slo:Shew_3724 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: A2V5D1 Diguanyl [...]
 
 
 0.884
Fbal_3482
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000160; KEGG: saz:Sama_0449 regulatory protein CsrD; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A2UWD6 Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain; GGDEF domain.
 
  
 0.872
Fbal_2224
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000160: IPR003018: IPR013656: IPR 000014: IPR000215; KEGG: sse:Ssed_2053 putative diguanylate phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SPTR: A2V156 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GAF domain; GGDEF domain; [...]
 
  
 0.860
Fbal_2915
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000160; KEGG: mms:mma_0597 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A3RNW6 Sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
  
 0.858
Fbal_2234
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000160: IPR017440; KEGG: saz:Sama_1829 putative diguanylate phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A0Y7D8 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.857
Fbal_2970
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR013656: IPR013767: IPR003594: IPR 003660: IPR003661: IPR013655: IPR008207: IPR001789: IPR001610:I PR000014: IPR000700: IPR005467; KEGG: slo:Shew_3200 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; Hpt domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator recei [...]
 
 0.829
Fbal_1243
Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: dar:Daro_2788 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: B9PA52 Predicted protein; PFAM: EAL domain.
 
  
 0.826
Fbal_1653
Response regulator receiver modulated diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR001789; KEGG: vha:VIBHAR_06170 sensory transduction protein kinase; PFAM: EAL domain protein; response regulator receiver; SMART: EAL domain protein; SPTR: A0YEF2 Response regulator; PFAM: EAL domain; Response regulator receiver domain.
 
  
 0.826
Fbal_1925
Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: gme:Gmet_0840 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A3H131 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
   0.788
Fbal_2742
Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: vsa:VSAL_II0426 putative GGDEF protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A3UMC2 Sensory transduction/ GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
  
   
 0.775
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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