STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2189Lipid A ABC exporter family, fused ATPase and inner membrane subunits; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR001140: IPR003593: IPR017871: IPR 017940: IPR011918; KEGG: son:SO_3665 ABC transporter, ATP-binding/permease protein, putative; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A2UX83 Lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter; ABC transport [...] (588 aa)    
Predicted Functional Partners:
Fbal_0604
Colicin V processing peptidase; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439: IPR005074: IPR001140: IPR003593: IPR 017940; KEGG: son:SO_A0049 toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A2UV24 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family.
 
 
 
0.755
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.607
Fbal_3434
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: saz:Sama_3080 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: A2V265 Putative uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
  
 
 0.598
Fbal_1830
ABC transporter related protein; COGs: COG5265 ABC-type transport system involved in Fe-S cluster assembly permease and ATPase components; InterPro IPR003439: IPR001140: IPR003593: IPR017871: IPR 017940; KEGG: ttu:TERTU_3889 Fe-S cluster ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A2UUL1 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter.
  
 
0.581
gltS
Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
       0.520
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.487
Fbal_0682
Aminotransferase class V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR001279: IPR000192: IPR020578: IPR001763; KEGG: slo:Shew_3354 aminotransferase, class V; PFAM: aminotransferase class V; beta-lactamase domain protein; SPTR: A0Y022 Putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily protein; PFAM: Rhodanese-like domain; Aminotransferase class-V.
  
 
 0.482
Fbal_1682
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: sse:Ssed_0501 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A2UUX6 ABC transporter related; PFAM: ABC transporter.
 
0.457
Fbal_1386
COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR000106: IPR017867; KEGG: saz:Sama_1994 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: A0Y5V4 Putative low molecular weight phosphotyrosine protein phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
   
   0.445
Fbal_1737
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.438
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.