STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2200D-lactate dehydrogenase (cytochrome); COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR004113: IPR006094: IPR017900; KEGG: saz:Sama_2071 oxidoreductase, FAD-binding, putative; PFAM: FAD linked oxidase domain protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: A2V1E4 FAD linked oxidase-like; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain. (1005 aa)    
Predicted Functional Partners:
Fbal_2718
Protein of unknown function DUF162; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741: IPR017900; KEGG: slo:Shew_3005 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: protein of unknown function DUF162; SPTR: A2UVD4 Iron-sulfur cluster-binding protein; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: 2[4Fe-4S] protein, putative.
  
 
 0.866
Fbal_0980
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730: IPR000049; KEGG: swd:Swoo_3236 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: A2V3B1 Electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.831
Fbal_2717
Protein of unknown function DUF162; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: swp:swp_3637 hypothetical protein; PFAM: protein of unknown function DUF162; SPTR: A2UVD3 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
  
 
 0.826
Fbal_0981
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731: IPR018206; KEGG: swd:Swoo_3235 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: A2V3B2 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.814
Fbal_2721
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.798
Fbal_2199
Protein of unknown function DUF1285; COGs: COG3816 conserved hypothetical protein; InterPro IPR010707; KEGG: pat:Patl_4276 hypothetical protein; PFAM: protein of unknown function DUF1285; SPTR: A3WU09 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1285).
       0.773
Fbal_2201
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
     
 0.649
Fbal_1081
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR013120: IPR002225: IPR003869: IPR001509: IPR 002198: IPR005888; KEGG: ttu:TERTU_4328 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; SPTR: A0Z331 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. d [...]
   
    0.645
Fbal_0458
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041: IPR006058: IPR004489; KEGG: lhk:LHK_02342 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; PRIAM: Succinate dehydrogenase; SPTR: A2UYL4 Succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.629
Fbal_2488
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041: IPR017900: IPR004489; KEGG: saz:Sama_1426 succinate dehydrogenase iron-sulfur subunit; PRIAM: Succinate dehydrogenase; SPTR: A2V1H3 Succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.629
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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