STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2276Methyltransferase type 11; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216: IPR013217; KEGG: vha:VIBHAR_06424 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; SPTR: A2VYZ5 SAM-dependent methyltransferase; PFAM: Methyltransferase domain. (239 aa)    
Predicted Functional Partners:
Fbal_1776
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551: IPR013216: IPR013217; KEGG: sse:Ssed_1437 MerR family transcriptional regulator; PFAM: Methyltransferase type 11; regulatory protein MerR; Methyltransferase type 12; SMART: regulatory protein MerR; SPTR: A3EHJ5 Signal transduction histidine kinase; PFAM: MerR family regulatory protein; Methyltransferase domain.
 
   
 0.569
Fbal_0424
InterPro IPR001647; KEGG: ppr:PBPRB0449 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A3XSU0 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.510
Fbal_2277
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR001035: IPR006665; KEGG: she:Shewmr4_2374 OmpA/MotB domain-containing protein; PFAM: OmpA/MotB domain protein; SPTR: A3WQH0 Sodium-type flagellar protein motY; PFAM: OmpA family.
       0.481
Fbal_0629
COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042: IPR002938: IPR006076: IPR018168: IPR 010971; KEGG: spl:Spea_3304 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; SPTR: A2UUI7 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
 
 
 
 0.408
Fbal_2274
COGs: COG1566 Multidrug resistance efflux pump; KEGG: swp:swp_0629 multidrug resistance efflux pump; SPTR: A3UQ37 Multidrug resistance efflux pump.
       0.408
Fbal_2275
KEGG: shl:Shal_3746 hypothetical protein.
       0.408
Fbal_3549
2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
   
 
 0.408
Fbal_3572
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: ppr:PBPRA1406 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Q5V418 Probable acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
     0.402
Fbal_2840
COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042: IPR013027: IPR002938: IPR006076: IPR 010971; KEGG: asa:ASA_1075 2-polyprenyl-6-methoxyphenol hydroxylase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; SPTR: A2UY74 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
 
 
 
 0.400
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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