STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2347KEGG: sse:Ssed_2370 hypothetical protein; SPTR: A3URU5 Putative uncharacterized protein. (457 aa)    
Predicted Functional Partners:
Fbal_2344
COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: sse:Ssed_2367 Flp pilus assembly protein ATPase CpaE-like protein; SPTR: A3URU2 Flp pilus assembly protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.984
Fbal_2342
Type II secretion system F domain protein; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: spl:Spea_2020 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: A3URU0 Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.980
Fbal_2350
COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR013974: IPR017592; KEGG: sse:Ssed_2372 Flp pilus assembly protein CpaB-like protein; PFAM: SAF domain protein; SPTR: A3URU8 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.978
Fbal_2341
Type II secretion system F domain protein; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: swp:swp_2653 tight adherence TadC-like transmembrane protein, putative; PFAM: Type II secretion system F domain; SPTR: A3URT9 Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
 
    0.967
Fbal_2343
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482: IPR017975; KEGG: sse:Ssed_2366 putative pilus assembly protein; PFAM: type II secretion system protein E; SPTR: A3URU1 Flp pilus assembly protein TadA; PFAM: Type II/IV secretion system protein.
 
  
 0.963
Fbal_2349
Type II and III secretion system protein; COGs: COG4964 Flp pilus assembly protein secretin CpaC; InterPro IPR001775: IPR004846: IPR004845; KEGG: swp:swp_2657 Flp pilus assembly protein; PFAM: type II and III secretion system protein; SPTR: A3URU7 Flp pilus assembly protein; PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.942
Fbal_2351
AAA ATPase; KEGG: spl:Spea_2011 AAA ATPase; SPTR: A3URU9 Predicted ATPase with chaperone activity.
 
    0.906
Fbal_2352
Peptidase A24A prepilin type IV; InterPro IPR000045; KEGG: swp:swp_2660 peptidase A24A, prepilin type IV; PFAM: peptidase A24A prepilin type IV; SPTR: A3S019 Prepilin Peptidase; cpaA1; PFAM: Type IV leader peptidase family.
 
  
 0.905
Fbal_2345
TadE family protein; InterPro IPR012495; KEGG: sse:Ssed_2368 hypothetical protein; PFAM: TadE family protein; SPTR: A2WIE8 Flp pilus assembly protein TadG; PFAM: TadE-like protein.
  
    0.831
Fbal_2346
TadE family protein; InterPro IPR012495; KEGG: sse:Ssed_2369 hypothetical protein; PFAM: TadE family protein; SPTR: A3URU4 Putative uncharacterized protein; PFAM: TadE-like protein.
  
    0.831
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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