STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2425COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090: IPR004089: IPR003660; KEGG: sfr:Sfri_1770 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: A2V0M7 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (517 aa)    
Predicted Functional Partners:
Fbal_1055
CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR004358: IPR008207: IPR004105: IPR002545: IPR 003594: IPR005467; KEGG: shm:Shewmr7_1369 CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; SPTR: A2UYZ8 CheA signal transduction histidine kinases; PFAM: CheW-like domain; Histidine kinase-, DNA gyra [...]
 
 0.988
Fbal_0104
Response regulator receiver modulated CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789: IPR002545; KEGG: saz:Sama_2201 chemotaxis protein CheV; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; SPTR: A2V174 Response regulator receiver modulated CheW protein; PFAM: CheW-like domain; Response regulator receiver domain.
 
 0.985
Fbal_2666
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.985
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.984
Fbal_1060
CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: amc:MADE_02863 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: A0Y196 Purine-binding chemotaxis protein; PFAM: CheW-like domain.
 
 0.984
Fbal_2667
Response regulator receiver modulated CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789: IPR002545; KEGG: sfr:Sfri_1159 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; SPTR: A2UYV5 Response regulator receiver modulated CheW protein; PFAM: CheW-like domain; Response regulator receiver domain.
 
 0.981
Fbal_1053
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: spl:Spea_1379 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A2UYZ6 Response regulator receiver protein; PFAM: Response regulator receiver domain.
 
 0.955
Fbal_1059
CheW protein; InterPro IPR002545; KEGG: ilo:IL1111 CheW-like domain-containing protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: A3WMQ6 CheW-like domain containing protein; PFAM: CheW-like domain.
 
 0.912
Fbal_3274
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR007597; KEGG: aha:AHA_1797 response regulator; PFAM: response regulator receiver; CheC domain protein; SMART: response regulator receiver; SPTR: A2UUS4 CheC, inhibitor of MCP methylation; PFAM: Response regulator receiver domain; CheC-like family.
 
 
 0.686
Fbal_2970
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR013656: IPR013767: IPR003594: IPR 003660: IPR003661: IPR013655: IPR008207: IPR001789: IPR001610:I PR000014: IPR000700: IPR005467; KEGG: slo:Shew_3200 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; Hpt domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator recei [...]
 
 
 0.610
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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