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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_2467Protein of unknown function DUF482; COGs: COG3146 conserved hypothetical protein; InterPro IPR007434; KEGG: swp:swp_2873 hypothetical protein; PFAM: protein of unknown function DUF482; SPTR: A0Y916 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF482. (382 aa)    
Predicted Functional Partners:
Fbal_2466
Protein of unknown function DUF885; COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: sfu:Sfum_3972 hypothetical protein; PFAM: protein of unknown function DUF885; SPTR: A8A947 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF885).
       0.773
Fbal_2964
COGs: COG0625 Glutathione S-transferase; InterPro IPR004046: IPR004045; KEGG: swp:swp_3870 glutathione S-transferase; PFAM: Glutathione S-transferase domain; SPTR: A2W0R7 Glutathione S-transferase; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
  
     0.474
Fbal_0175
COGs: COG0625 Glutathione S-transferase; InterPro IPR004045; KEGG: avn:Avin_05780 glutathione S-transferase-like protein; PFAM: Glutathione S-transferase domain; SPTR: A3L9S6 Putative uncharacterized protein; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain.
  
     0.466
bpt
Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
 
     0.466
Fbal_2470
InterPro IPR010342; KEGG: dia:Dtpsy_2352 protein of unknown function DUF938; PFAM: protein of unknown function DUF938; SPTR: A0Y917 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF938).
 
     0.449
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
 
     0.413
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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