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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_3198KEGG: shn:Shewana3_2601 hypothetical protein; SPTR: A2V2Z2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2810). (118 aa)    
Predicted Functional Partners:
lapA
Protein of unknown function DUF1049; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.761
Fbal_2515
Protein of unknown function UPF0227; COGs: COG3150 esterase; InterPro IPR008886; KEGG: ses:SARI_01781 hypothetical protein; PFAM: protein of unknown function UPF0227; SPTR: B4TTI0 UPF0227 protein ycfP; PFAM: Uncharacterised protein family (UPF0227); Belongs to the UPF0227 family.
  
     0.720
Fbal_3135
Porin Gram-negative type; COGs: COG3203 Outer membrane protein (porin); InterPro IPR001897: IPR001702; KEGG: vpa:VPA0527 outer membrane protein N, non-specific porin; PFAM: porin Gram-negative type; SPTR: A3XTL7 Outer membrane protein N, non-specific porin; PFAM: Gram-negative porin.
  
     0.712
Fbal_1161
Porin Gram-negative type; COGs: COG3203 Outer membrane protein (porin); InterPro IPR001897: IPR001702; KEGG: vsp:VS_II0361 outer membrane protein N; PFAM: porin Gram-negative type; SPTR: A3XTL7 Outer membrane protein N, non-specific porin; PFAM: Gram-negative porin.
  
     0.666
Fbal_1809
KEGG: sfr:Sfri_2985 major outer membrane lipoprotein, putative; SPTR: A2V2A3 Major outer membrane lipoprotein, putative.
  
     0.641
Fbal_1162
Porin Gram-negative type; COGs: COG3203 Outer membrane protein (porin); InterPro IPR001702; KEGG: saz:Sama_3336 outer membrane porin, putative; PFAM: porin Gram-negative type; SPTR: A2V3C9 Porin, Gram-negative type; PFAM: Gram-negative porin.
  
     0.614
Fbal_1696
COGs: COG3274 conserved hypothetical protein; KEGG: ppr:PBPRA0144 hypothetical protein; SPTR: A3UXM7 Putative inner membrane protein; PFAM: Acyltransferase family.
  
   
 0.613
zapC
Protein of unknown function DUF1379; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.603
Fbal_0617
Protein of unknown function DUF903; InterPro IPR010305; KEGG: vha:VIBHAR_05819 hypothetical protein; PFAM: protein of unknown function DUF903; SPTR: P65297 Uncharacterized lipoprotein ygdR; PFAM: Bacterial protein of unknown function (DUF903).
  
     0.554
Fbal_2617
YfcL protein; InterPro IPR014987; KEGG: slo:Shew_2413 hypothetical protein; PFAM: YfcL protein; SPTR: A2V1C1 Putative uncharacterized protein; PFAM: YfcL protein.
  
     0.545
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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