STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_3208Electron transfer DM13; InterPro IPR019545; KEGG: aha:AHA_0124 phenylalanyl-tRNA synthetase beta subunit; PFAM: Electron transfer DM13; SPTR: A0YBM8 Phenylalanyl-tRNA synthetase beta subunit; PFAM: Electron transfer DM13. (159 aa)    
Predicted Functional Partners:
Fbal_3209
Aminopeptidase B; Probably plays an important role in intracellular peptide degradation.
       0.476
Fbal_0567
InterPro IPR000866: IPR013740; KEGG: vha:VIBHAR_06328 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; SPTR: A3SX47 Thioredoxin peroxidase; PFAM: AhpC/TSA family.
 
     0.413
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.