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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_3545Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR003660; KEGG: pat:Patl_1079 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; SPTR: A3J8U6 EAL domain protein; PFAM: EAL domain; HAMP domain. (639 aa)    
Predicted Functional Partners:
Fbal_3546
Transglutaminase family protein cysteine peptidase BTLCP; COGs: COG3672 periplasmic protein; InterPro IPR010319; KEGG: pat:Patl_1080 periplasmic protein; PFAM: transglutaminase family protein cysteine peptidase BTLCP; SPTR: A3UNS7 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF920).
 
 
 
 0.952
Fbal_0373
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013655: IPR011110: IPR001633: IPR000160: IPR 013767: IPR013656: IPR001610: IPR000014: IPR000700: IPR002345; KEGG: shw:Sputw3181_0529 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; PAS fold-3 domain protein; Two component regulator propeller; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing p [...]
 
 
 0.740
Fbal_2970
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR013656: IPR013767: IPR003594: IPR 003660: IPR003661: IPR013655: IPR008207: IPR001789: IPR001610:I PR000014: IPR000700: IPR005467; KEGG: slo:Shew_3200 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; Hpt domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator recei [...]
 
 
 0.721
Fbal_3322
Diguanylate cyclase/phosphodiesterase with GAF sensor; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633: IPR000160: IPR003018; KEGG: cps:CPS_4411 GAF domain/GGDEF domain/EAL domain-containing protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SPTR: A3WIV0 Intracellular signaling protein (GAF,GGDEF,EAL domains); TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GG [...]
 
  
 0.713
Fbal_0382
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000160: IPR013767: IPR013656: IPR 000700: IPR000014; KEGG: son:SO_0437 sensory box protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A2UV29 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase [...]
 
  
 0.708
Fbal_2626
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR011110: IPR013655: IPR001633: IPR000160: IPR 011123: IPR013656: IPR001610: IPR000014: IPR000700; KEGG: slo:Shew_2421 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: EAL domain protein; PAS fold-3 domain protein; Two component regulator propeller; GGDEF domain containing protein; Two component regulator three Y domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF doma [...]
 
 
 0.700
fis
Transcriptional regulator, Fis family; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.
    
 
 0.699
Fbal_1472
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR007891: IPR000160; KEGG: sse:Ssed_1116 hypothetical protein; PFAM: GGDEF domain containing protein; CHASE3 domain protein; SMART: GGDEF domain containing protein; SPTR: A3LI29 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; CHASE3 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.698
Fbal_3751
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013655: IPR001633: IPR000160: IPR003660: IPR 001610: IPR000014; KEGG: slo:Shew_3724 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: A2V5D1 Diguanyl [...]
 
 
 0.694
Fbal_1864
COGs: COG3215 Tfp pilus assembly protein PilZ; KEGG: sdn:Sden_2049 type IV pilus assembly PilZ; SPTR: A2V2S3 Type IV pilus biogenesis protein pilZ; PFAM: PilZ domain.
  
 
   0.656
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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