STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Fbal_3573Antibiotic biosynthesis monooxygenase; COGs: COG1359 conserved hypothetical protein; InterPro IPR007138; KEGG: vsp:VS_II0102 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A3USF4 Lipoprotein; PFAM: Antibiotic biosynthesis monooxygenase. (94 aa)    
Predicted Functional Partners:
Fbal_2101
Short-chain dehydrogenase/reductase SDR; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347: IPR002198: IPR013968; KEGG: pin:Ping_2106 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; SPTR: A3UPP7 Probable oxidoreductase; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.497
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
    0.477
Fbal_3574
Transcriptional antiterminator, Rof; InterPro IPR009778; KEGG: cja:CJA_0248 modulator of Rho-dependent transcription termination (ROF) superfamily; PFAM: Modulator of Rho-dependent transcription termination; SPTR: A3UM43 Putative uncharacterized protein; PFAM: Modulator of Rho-dependent transcription termination (ROF).
       0.465
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
       0.445
Fbal_1534
COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR020449: IPR013096: IPR003313: IPR018060; KEGG: spl:Spea_2769 AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; SPTR: A3UNR5 Putative uncharacterized protein; PFAM: AraC-like ligand binding domain.
 
  
 0.424
Fbal_0567
InterPro IPR000866: IPR013740; KEGG: vha:VIBHAR_06328 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; SPTR: A3SX47 Thioredoxin peroxidase; PFAM: AhpC/TSA family.
 
     0.423
Fbal_1272
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: dvl:Dvul_0250 nitroreductase; PFAM: nitroreductase; SPTR: O34475 Putative NAD(P)H nitroreductase yfkO; PFAM: Nitroreductase family.
 
    0.408
Fbal_1771
COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR020449: IPR018060; KEGG: spl:Spea_2769 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: A3UNR5 Putative uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
 
  
 0.407
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.