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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_3752HI0933 family protein; COGs: COG2081 flavoprotein; InterPro IPR013027: IPR006076: IPR003953: IPR004792; KEGG: slo:Shew_3802 hypothetical protein; PFAM: HI0933 family protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A3GZ20 Putative uncharacterized protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275. (393 aa)    
Predicted Functional Partners:
gpsA
COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168: IPR011128: IPR013332: IPR006109; KEGG: kpu:KP1_5301 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: A6TFK3 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus.
     
 0.647
secB
Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
       0.529
Fbal_1311
Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: mmw:Mmwyl1_2654 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A2V316 Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
    0.405
Fbal_2729
Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: saz:Sama_1387 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A2P2Z8 Putative uncharacterized protein.
  
    0.405
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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