STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQP58551.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (341 aa)    
Predicted Functional Partners:
OQP63628.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.818
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.773
OQP45850.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.667
OQP58583.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.630
OQP60291.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
OQP59321.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.556
OQP67651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.534
OQP58686.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
OQP45627.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.514
OQP59363.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.508
Your Current Organism:
Niastella populi
NCBI taxonomy Id: 550983
Other names: CCTCC AB 208238, KCTC 22560, N. populi, Niastella populi Zhang et al. 2010, Niastella sp. THYL-44, strain THYL-44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.