STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQP66717.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
OQP66718.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OQP65584.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OQP45833.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.989
OQP53508.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
OQP48931.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
OQP45672.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
OQP53744.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.964
OQP68376.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.930
OQP68377.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.930
OQP59358.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.930
Your Current Organism:
Niastella populi
NCBI taxonomy Id: 550983
Other names: CCTCC AB 208238, KCTC 22560, N. populi, Niastella populi Zhang et al. 2010, Niastella sp. THYL-44, strain THYL-44
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