STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcTProtein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (198 aa)    
Predicted Functional Partners:
cpcS-2
Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.834
Aazo_3489
KEGG: ava:Ava_2930 phycocyanin, beta subunit; TIGRFAM: phycocyanin, beta subunit; PFAM: Phycocyanin.
  
   
 0.822
Aazo_2432
PFAM: Phycocyanin; KEGG: ava:Ava_2621 phycobilisome protein.
  
   
 0.814
Aazo_2433
KEGG: ava:Ava_2622 allophycocyanin subunit beta; TIGRFAM: allophycocyanin, beta subunit; PFAM: Phycocyanin.
  
   
 0.814
Aazo_3484
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ana:alr0533 phycocyanobilin lyase beta subunit.
 
   
 0.814
Aazo_0297
PFAM: Phycocyanin; KEGG: ana:alr0523 phycoerythrocyanin beta chain.
  
   
 0.813
Aazo_3487
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: ana:alr0530 phycocyanin-associated rod linker protein; Belongs to the phycobilisome linker protein family.
 
   
 0.812
Aazo_3485
KEGG: ana:alr0532 phycocyanobilin lyase alpha subunit; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein.
  
   
 0.811
Aazo_0295
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: ava:Ava_2927 CpcD phycobilisome linker-like; Belongs to the phycobilisome linker protein family.
 
   
 0.809
Aazo_3488
KEGG: ava:Ava_2931 phycocyanin, alpha subunit; TIGRFAM: phycocyanin, alpha subunit; PFAM: Phycocyanin.
  
   
 0.808
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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