STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_2469KEGG: ava:Ava_4081 dienelactone hydrolase. (239 aa)    
Predicted Functional Partners:
Aazo_2468
PFAM: phosphoribosyltransferase; KEGG: cyn:Cyan7425_1158 phosphoribosyltransferase.
     0.991
Aazo_1935
KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase.
 
   
 0.439
Aazo_3381
PFAM: peptidase M50; CBS domain containing protein; KEGG: ava:Ava_1797 peptidase M50; Belongs to the peptidase M50B family.
  
     0.432
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.