Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Aazo_1660 | Aazo_2554 | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: ava:Ava_4939 AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2. | KEGG: ava:Ava_1634 hypothetical protein. | 0.412 |
Aazo_1660 | Aazo_2870 | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: ava:Ava_4939 AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2. | KEGG: ava:Ava_1345 hypothetical protein. | 0.582 |
Aazo_2182 | Aazo_2554 | KEGG: npu:Npun_R2894 hypothetical protein. | KEGG: ava:Ava_1634 hypothetical protein. | 0.476 |
Aazo_2182 | Aazo_2870 | KEGG: npu:Npun_R2894 hypothetical protein. | KEGG: ava:Ava_1345 hypothetical protein. | 0.708 |
Aazo_2182 | Aazo_3787 | KEGG: npu:Npun_R2894 hypothetical protein. | KEGG: npu:Npun_R2816 hypothetical protein. | 0.734 |
Aazo_2182 | Aazo_4769 | KEGG: npu:Npun_R2894 hypothetical protein. | KEGG: ava:Ava_4494 hypothetical protein. | 0.527 |
Aazo_2554 | Aazo_1660 | KEGG: ava:Ava_1634 hypothetical protein. | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: ava:Ava_4939 AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2. | 0.412 |
Aazo_2554 | Aazo_2182 | KEGG: ava:Ava_1634 hypothetical protein. | KEGG: npu:Npun_R2894 hypothetical protein. | 0.476 |
Aazo_2554 | Aazo_2870 | KEGG: ava:Ava_1634 hypothetical protein. | KEGG: ava:Ava_1345 hypothetical protein. | 0.470 |
Aazo_2870 | Aazo_1660 | KEGG: ava:Ava_1345 hypothetical protein. | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: ava:Ava_4939 AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2. | 0.582 |
Aazo_2870 | Aazo_2182 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: npu:Npun_R2894 hypothetical protein. | 0.708 |
Aazo_2870 | Aazo_2554 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: ava:Ava_1634 hypothetical protein. | 0.470 |
Aazo_2870 | Aazo_3211 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: ava:Ava_0421 hypothetical protein. | 0.577 |
Aazo_2870 | Aazo_3318 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: npu:Npun_R0605 hypothetical protein. | 0.457 |
Aazo_2870 | Aazo_3787 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: npu:Npun_R2816 hypothetical protein. | 0.596 |
Aazo_2870 | Aazo_4587 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: ava:Ava_0868 high light inducible protein. | 0.616 |
Aazo_2870 | Aazo_4655 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: npu:Npun_R1884 hypothetical protein. | 0.477 |
Aazo_2870 | Aazo_4769 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: ava:Ava_4494 hypothetical protein. | 0.566 |
Aazo_2870 | Aazo_4937 | KEGG: ava:Ava_1345 hypothetical protein. | KEGG: npu:Npun_R6614 hypothetical protein. | 0.456 |
Aazo_3211 | Aazo_2870 | KEGG: ava:Ava_0421 hypothetical protein. | KEGG: ava:Ava_1345 hypothetical protein. | 0.577 |
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