STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_3008PFAM: MotA/TolQ/ExbB proton channel; KEGG: npu:Npun_R4966 MotA/TolQ/ExbB proton channel. (210 aa)    
Predicted Functional Partners:
Aazo_3007
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ana:all5046 hypothetical protein.
 
 
 0.980
Aazo_0487
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ava:Ava_2305 biopolymer transport protein ExbD/TolR.
 
 
 0.962
Aazo_2615
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: npu:Npun_R5173 biopolymer transport protein ExbD/TolR.
 
 
 0.955
Aazo_2447
KEGG: ava:Ava_1932 hypothetical protein.
  
 
 0.888
Aazo_2046
KEGG: npu:Npun_F0785 hypothetical protein.
  
 
 0.788
Aazo_4389
KEGG: npu:Npun_R1131 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
   
 0.661
Aazo_3738
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.658
Aazo_5078
PFAM: outer membrane efflux protein; KEGG: npu:Npun_R2885 outer membrane efflux protein.
  
   
 0.650
Aazo_3741
PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: npu:Npun_F2928 surface antigen (D15).
  
     0.627
Aazo_4390
PFAM: permease YjgP/YjgQ family protein; KEGG: ava:Ava_1637 permease YjgP/YjgQ.
  
     0.597
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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