STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_3209PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: ana:all1322 hypothetical protein. (743 aa)    
Predicted Functional Partners:
Aazo_3210
Hypothetical protein.
       0.773
Aazo_2822
KEGG: ana:all0443 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
 
     0.738
Aazo_1199
KEGG: ana:alr2323 heat shock protein 90; PFAM: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like; SMART: ATP-binding region ATPase domain protein.
   
 0.572
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.565
Aazo_4090
KEGG: npu:Npun_R0083 hypothetical protein.
   
 0.538
Aazo_4306
KEGG: ana:alr3430 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
     0.523
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.498
Aazo_5186
PFAM: WD40 repeat, subgroup; KEGG: npu:Npun_R3840 WD-40 repeat-containing protein.
  
 
  0.486
Aazo_3896
KEGG: npu:Npun_R1546 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; WD-40 repeat protein.
  
 0.453
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.438
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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