STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_3213PFAM: TPR repeat-containing protein; KEGG: npu:Npun_R4816 TPR repeat-containing protein. (227 aa)    
Predicted Functional Partners:
Aazo_1891
PFAM: TPR repeat-containing protein; KEGG: npu:Npun_F4407 TPR repeat-containing protein.
  
     0.766
Aazo_1811
KEGG: npu:Npun_R3512 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
     0.761
Aazo_3135
PFAM: TPR repeat-containing protein; KEGG: npu:Npun_R1081 TPR repeat-containing protein.
  
    0.701
Aazo_4090
KEGG: npu:Npun_R0083 hypothetical protein.
  
 0.616
Aazo_4306
KEGG: ana:alr3430 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
     0.598
Aazo_1199
KEGG: ana:alr2323 heat shock protein 90; PFAM: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like; SMART: ATP-binding region ATPase domain protein.
   
 0.572
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.565
Aazo_3581
WD40 repeat, subgroup; KEGG: npu:Npun_F3993 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein.
  
 
  0.508
Aazo_2798
WD40 repeat, subgroup; KEGG: npu:Npun_F0541 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein.
  
 
  0.499
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.498
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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