STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_3481PFAM: Phycobilisome linker polypeptide; KEGG: ava:Ava_2939 phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. (253 aa)    
Predicted Functional Partners:
Aazo_3489
KEGG: ava:Ava_2930 phycocyanin, beta subunit; TIGRFAM: phycocyanin, beta subunit; PFAM: Phycocyanin.
 
 
 
 0.994
Aazo_3655
PFAM: Phycocyanin; KEGG: ava:Ava_3635 phycobilisome protein.
  
 
 
 0.993
Aazo_2432
PFAM: Phycocyanin; KEGG: ava:Ava_2621 phycobilisome protein.
  
 
 
 0.992
Aazo_2434
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.992
Aazo_3714
KEGG: npu:Npun_F5388 allophycocyanin, beta subunit ApcB; TIGRFAM: allophycocyanin, beta subunit; PFAM: Phycocyanin.
  
 
 
 0.992
Aazo_2433
KEGG: ava:Ava_2622 allophycocyanin subunit beta; TIGRFAM: allophycocyanin, beta subunit; PFAM: Phycocyanin.
  
 
 
 0.991
Aazo_3482
PFAM: Phycobilisome linker polypeptide; KEGG: ana:alr0535 phycobilisome rod-core linker protein; Belongs to the phycobilisome linker protein family.
 
 
 
0.982
Aazo_3487
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: ana:alr0530 phycocyanin-associated rod linker protein; Belongs to the phycobilisome linker protein family.
 
 
 
0.981
Aazo_2430
PFAM: Phycobilisome linker polypeptide; Phycocyanin; KEGG: ava:Ava_2620 phycobilisome protein; Belongs to the phycobilisome linker protein family.
  
 
 
0.978
Aazo_3483
PFAM: Phycobilisome linker polypeptide; KEGG: ana:alr0534 phycobilisome rod-core linker protein; Belongs to the phycobilisome linker protein family.
 
 
 
0.977
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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