STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_3779PFAM: Carbohydrate-selective porin OprB; S-layer domain protein; KEGG: ava:Ava_2510 S-layer region-like; Belongs to the OprB family. (561 aa)    
Predicted Functional Partners:
Aazo_1068
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.743
Aazo_3741
PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: npu:Npun_F2928 surface antigen (D15).
  
   
 0.737
Aazo_1067
KEGG: npu:Npun_F5512 hypothetical protein.
  
     0.709
Aazo_4390
PFAM: permease YjgP/YjgQ family protein; KEGG: ava:Ava_1637 permease YjgP/YjgQ.
  
     0.682
Aazo_0929
TIGRFAM: conserved hypothetical protein; KEGG: npu:Npun_R1454 hypothetical protein.
  
     0.647
Aazo_1183
KEGG: ana:alr3874 hypothetical protein.
  
     0.641
Aazo_0061
KEGG: npu:Npun_R5944 transcriptional regulator AbrB.
  
    0.614
Aazo_5080
KEGG: npu:Npun_R2883 hypothetical protein.
  
     0.611
Aazo_0999
KEGG: ava:Ava_4349 hypothetical protein.
  
     0.550
Aazo_0928
PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: ana:alr4893 hypothetical protein.
  
   
 0.529
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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