STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_3928PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ana:all5042 permease protein of polyamine ABC transporter. (305 aa)    
Predicted Functional Partners:
Aazo_3072
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: npu:Npun_F2640 binding-protein-dependent transport systems inner membrane component.
 
0.998
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.998
Aazo_3929
PFAM: extracellular solute-binding protein family 1; KEGG: npu:Npun_F6007 extracellular solute-binding protein.
 
 
 0.994
Aazo_3417
PFAM: extracellular solute-binding protein family 1; KEGG: npu:Npun_F3496 extracellular solute-binding protein.
 
  
 0.943
Aazo_3139
KEGG: npu:Npun_R5940 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
   
 0.546
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
     0.432
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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