STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_4276PFAM: UspA domain protein; KEGG: ava:Ava_0771 hypothetical protein. (135 aa)    
Predicted Functional Partners:
Aazo_2467
PFAM: UspA domain protein; KEGG: ana:all1122 hypothetical protein.
  
     0.685
Aazo_1021
PFAM: UspA domain protein; KEGG: npu:Npun_R4981 UspA domain-containing protein.
  
     0.677
pgk
KEGG: ava:Ava_0772 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
    0.605
Aazo_4228
Two component transcriptional regulator, winged helix family; KEGG: ava:Ava_0238 multi-component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein.
  
  
 0.453
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.